Showing posts tagged Biogeography.
x

IntelligentDesign/RandomDrift

curriculum vitae   Oxalis research   teaching   cars   photography   Brasil 2011   

Andy Gardner; andyggardner@gmail.com, aggardner@wisc.edu; husband / grad student / teacher / photoshopaholic / espresso-obsessive / car nut / etc.
Plant lineage biome shifts within southern hemisphere landmasses.
From Crisp et al., Nature, 2009.

Plant lineage biome shifts within southern hemisphere landmasses.

From Crisp et al., Nature, 2009.

— 8 months ago with 27 notes
#professional  #design  #biome  #Biogeography  #ecology  #phylogeny  #science 
Bayesian 50% majority-rule consensus topology of combined nrITS and plastid datasets with Bayes Multistate reconstruction of ancestral geographic states. Pie graphs represent the distribution of posterior probabilities of ancestral states for each node. Colors represent the geographic coding (Red: Patagonia; Green: SE South America; Purple: Andes; Turquoise: Central America and southern Mexico; Orange: MTVB and north; Dark Blue: Africa). Provinces/departments/states are shaded on the maps based on the distributions of taxa represented by the phylogeny, based on data from Denton (1973) and Lourteig (2000). The widely-distributed weeds O. debilis and O. latifolia are not mapped.

Bayesian 50% majority-rule consensus topology of combined nrITS and plastid datasets with Bayes Multistate reconstruction of ancestral geographic states. Pie graphs represent the distribution of posterior probabilities of ancestral states for each node. Colors represent the geographic coding (Red: Patagonia; Green: SE South America; Purple: Andes; Turquoise: Central America and southern Mexico; Orange: MTVB and north; Dark Blue: Africa). Provinces/departments/states are shaded on the maps based on the distributions of taxa represented by the phylogeny, based on data from Denton (1973) and Lourteig (2000). The widely-distributed weeds O. debilis and O. latifolia are not mapped.

— 1 year ago with 5 notes
#oxalis  #professional  #phylogeny  #design  #bulb  #ionoxalis  #pseudobulbosae  #palmatifoliae  #articulatae  #map  #Biogeography  #ESS niche evolution  #Brasil 2011 
The foothills of the Serra Geral, Santa Catarina, Brasil.

The foothills of the Serra Geral, Santa Catarina, Brasil.

— 1 year ago
#geral  #brasil  #Brasil 2011  #professional  #photography  #Biogeography 
By CARL ZIMMER
Published: January 25, 2011
Vladimir Nabokov may be known to most people as the author of classic novels like  “Lolita” and “Pale Fire.” But even as he was writing those books,  Nabokov had a parallel existence as  a self-taught expert on  butterflies.
He was the curator of lepidoptera at the Museum of Comparative Zoology at Harvard University,  and collected the insects across the United States. He published  detailed descriptions of hundreds of species. And in a speculative  moment in 1945, he came up with a sweeping hypothesis for the evolution  of the butterflies he studied, a group known as the Polyommatus blues.  He envisioned them coming to the New World from Asia over millions of  years in a series of waves.
Few professional lepidopterists took these ideas  seriously during  Nabokov’s lifetime.  But in the years since his death in 1977,  his  scientific reputation has grown.   And over the past 10 years, a team of  scientists has been applying gene-sequencing technology to his   hypothesis about how Polyommatus blues evolved. On Tuesday in the  Proceedings of the Royal Society of London, they reported that Nabokov   was absolutely right.
“It’s really quite a marvel,” said Naomi Pierce of Harvard, a co-author of the paper.
Nabokov inherited his passion for butterflies from his parents. When his  father was imprisoned by the Russian authorities for his political  activities, the 8-year-old Vladimir brought a butterfly to his cell as a  gift. As a teenager, Nabokov went on butterfly-hunting expeditions and  carefully described the specimens he caught, imitating the scientific  journals he read in his spare time. Had it not been for the Russian  Revolution, which forced his family into exile in 1919, Nabokov said  that he might have become a full-time lepidopterist.
In his European exile, Nabokov visited butterfly collections in museums.  He used the proceeds of his second novel, “King, Queen, Knave,” to  finance an expedition to the Pyrenees, where he and his wife, Vera,  netted over a hundred species. The rise of the Nazis drove Nabokov into  exile once more in 1941, this time to the United States. It was there  that Nabokov found his greatest fame as a novelist. It was also there  that he delved deepest into the science of butterflies.
Nabokov spent much of the 1940s dissecting a confusing group of species  called Polyommatus blues. He developed forward thinking ways to classify  the butterflies based on differences in their genitalia. He argued that  what were thought to be closely related species were actually only  distantly related.
At the end of a 1945 paper on the group, he mused on how they had  evolved. He speculated that they originated in Asia, moved over the  Bering Strait, and moved south all the way to Chile.
Allowing himself a few literary flourishes, Nabokov invited his readers  to imagine “a modern taxonomist straddling a Wellsian time machine.”  Going back millions of years, he would end up at a time when only Asian  forms of the butterflies existed. Then, moving forward again, the  taxonomist would see five waves of butterflies arriving in the New  World.
Nabokov conceded that the thought of butterflies making a trip from  Siberia to Alaska and then all the way down into South America might  sound far-fetched. But it made more sense to him than an unknown land  bridge spanning the Pacific. “I find it easier to give a friendly little  push to some of the forms and hang my distributional horseshoes on the  nail of Nome rather than postulate transoceanic land-bridges in other  parts of the world,” he wrote.
When “Lolita” made Nabokov a star in 1958, journalists were delighted to  discover his hidden life as a butterfly expert. A famous photograph of  Nabokov that appeared in The Saturday Evening Post when he was 66 is  from a butterfly’s perspective. The looming Russian author swings a net  with rapt concentration. But despite the fact that he was the best-known  butterfly expert of his day and a Harvard museum curator,  other  lepidopterists considered Nabokov a dutiful but undistinguished  researcher. He could describe details well, they granted, but did not  produce scientifically important ideas.
Only in the 1990s did a team of scientists systematically review his  work and recognize the strength of his classifications. Dr. Pierce, who  became a Harvard biology professor and curator of lepidoptera in 1990,  began looking closely at Nabokov’s work while preparing an exhibit to  celebrate his 100th birthday in 1999. She was captivated by his idea of  butterflies coming from Asia. “It was an amazing, bold hypothesis,” she  said. “And I thought, ‘Oh, my God, we could test this.’ ”
To do so, she would need to reconstruct the evolutionary tree of blues,  and estimate when the branches split. It would have been impossible for  Nabokov to do such a study on the anatomy of butterflies alone. Dr.  Pierce would need their DNA, which could provide more detail about their  evolutionary history.
Working with American and European lepidopterists, Dr. Pierce organized  four separate expeditions into the Andes in search of blues. Back at her  lab at Harvard, she and her colleagues sequenced the genes of the  butterflies and used a computer to calculate the most likely  relationships between them. They also compared the number of mutations  each species had acquired to determine how long ago they had diverged  from one another.
There were several plausible hypotheses for how the butterflies might  have evolved. They might have evolved in the Amazon, with the rising  Andes fragmenting their populations. If that were true, the species  would be closely related to each other.
But that is not what Dr. Pierce found. Instead, she and her colleagues  found that the New World species shared a common ancestor that lived  about 10 million years ago. But many New World species were more closely  related to Old World butterflies than to their neighbors. Dr. Pierce  and her colleagues concluded that five waves of butterflies came from  Asia to the New World — just as Nabokov had speculated.
“By God, he got every one right,” Dr. Pierce said. “I couldn’t get over it — I was blown away.”
Dr. Pierce and her colleagues also investigated Nabokov’s idea that the  butterflies had come over the Bering Strait. The land surrounding the  strait was relatively warm 10 million years ago, and has been chilling  steadily ever since. Dr. Pierce and her colleagues found that the first  lineage of Polyommatus blues that made the journey could survive a  temperature range that matched the Bering climate of 10 million years  ago. The lineages that came later are more cold hardy, each with a  temperature range matching the falling temperatures.
Nabokov’s taxonomic horseshoes turn out to belong in Nome after all.
“What a great paper,” said James Mallet, an expert on butterfly  evolution at University College London. “It’s a fitting tribute to the  great man to see that the most modern methods that technology can  deliver now largely support his systematic arrangement.”
Dr. Pierce says she believes Nabokov would have been greatly pleased to  be so vindicated, and points to one of his most famous poems, “On  Discovering a Butterfly.” The 1943 poem begins:
I found it and I named it, being versed
in taxonomic Latin; thus became
godfather to an insect and its first
describer — and I want no other fame.
“He felt that his scientific work was standing for all time, and that he  was just a player in a much bigger enterprise,” said Dr. Pierce. “He  was not known as a scientist, but this certainly indicates to me that he  knew what it’s all about.”

Vladimir Nabokov may be known to most people as the author of classic novels like “Lolita” and “Pale Fire.” But even as he was writing those books, Nabokov had a parallel existence as a self-taught expert on butterflies.

He was the curator of lepidoptera at the Museum of Comparative Zoology at Harvard University, and collected the insects across the United States. He published detailed descriptions of hundreds of species. And in a speculative moment in 1945, he came up with a sweeping hypothesis for the evolution of the butterflies he studied, a group known as the Polyommatus blues. He envisioned them coming to the New World from Asia over millions of years in a series of waves.

Few professional lepidopterists took these ideas seriously during Nabokov’s lifetime. But in the years since his death in 1977, his scientific reputation has grown. And over the past 10 years, a team of scientists has been applying gene-sequencing technology to his hypothesis about how Polyommatus blues evolved. On Tuesday in the Proceedings of the Royal Society of London, they reported that Nabokov was absolutely right.

“It’s really quite a marvel,” said Naomi Pierce of Harvard, a co-author of the paper.

Nabokov inherited his passion for butterflies from his parents. When his father was imprisoned by the Russian authorities for his political activities, the 8-year-old Vladimir brought a butterfly to his cell as a gift. As a teenager, Nabokov went on butterfly-hunting expeditions and carefully described the specimens he caught, imitating the scientific journals he read in his spare time. Had it not been for the Russian Revolution, which forced his family into exile in 1919, Nabokov said that he might have become a full-time lepidopterist.

In his European exile, Nabokov visited butterfly collections in museums. He used the proceeds of his second novel, “King, Queen, Knave,” to finance an expedition to the Pyrenees, where he and his wife, Vera, netted over a hundred species. The rise of the Nazis drove Nabokov into exile once more in 1941, this time to the United States. It was there that Nabokov found his greatest fame as a novelist. It was also there that he delved deepest into the science of butterflies.

Nabokov spent much of the 1940s dissecting a confusing group of species called Polyommatus blues. He developed forward thinking ways to classify the butterflies based on differences in their genitalia. He argued that what were thought to be closely related species were actually only distantly related.

At the end of a 1945 paper on the group, he mused on how they had evolved. He speculated that they originated in Asia, moved over the Bering Strait, and moved south all the way to Chile.

Allowing himself a few literary flourishes, Nabokov invited his readers to imagine “a modern taxonomist straddling a Wellsian time machine.” Going back millions of years, he would end up at a time when only Asian forms of the butterflies existed. Then, moving forward again, the taxonomist would see five waves of butterflies arriving in the New World.

Nabokov conceded that the thought of butterflies making a trip from Siberia to Alaska and then all the way down into South America might sound far-fetched. But it made more sense to him than an unknown land bridge spanning the Pacific. “I find it easier to give a friendly little push to some of the forms and hang my distributional horseshoes on the nail of Nome rather than postulate transoceanic land-bridges in other parts of the world,” he wrote.

When “Lolita” made Nabokov a star in 1958, journalists were delighted to discover his hidden life as a butterfly expert. A famous photograph of Nabokov that appeared in The Saturday Evening Post when he was 66 is from a butterfly’s perspective. The looming Russian author swings a net with rapt concentration. But despite the fact that he was the best-known butterfly expert of his day and a Harvard museum curator, other lepidopterists considered Nabokov a dutiful but undistinguished researcher. He could describe details well, they granted, but did not produce scientifically important ideas.

Only in the 1990s did a team of scientists systematically review his work and recognize the strength of his classifications. Dr. Pierce, who became a Harvard biology professor and curator of lepidoptera in 1990, began looking closely at Nabokov’s work while preparing an exhibit to celebrate his 100th birthday in 1999. She was captivated by his idea of butterflies coming from Asia. “It was an amazing, bold hypothesis,” she said. “And I thought, ‘Oh, my God, we could test this.’ ”

To do so, she would need to reconstruct the evolutionary tree of blues, and estimate when the branches split. It would have been impossible for Nabokov to do such a study on the anatomy of butterflies alone. Dr. Pierce would need their DNA, which could provide more detail about their evolutionary history.

Working with American and European lepidopterists, Dr. Pierce organized four separate expeditions into the Andes in search of blues. Back at her lab at Harvard, she and her colleagues sequenced the genes of the butterflies and used a computer to calculate the most likely relationships between them. They also compared the number of mutations each species had acquired to determine how long ago they had diverged from one another.

There were several plausible hypotheses for how the butterflies might have evolved. They might have evolved in the Amazon, with the rising Andes fragmenting their populations. If that were true, the species would be closely related to each other.

But that is not what Dr. Pierce found. Instead, she and her colleagues found that the New World species shared a common ancestor that lived about 10 million years ago. But many New World species were more closely related to Old World butterflies than to their neighbors. Dr. Pierce and her colleagues concluded that five waves of butterflies came from Asia to the New World — just as Nabokov had speculated.

“By God, he got every one right,” Dr. Pierce said. “I couldn’t get over it — I was blown away.”

Dr. Pierce and her colleagues also investigated Nabokov’s idea that the butterflies had come over the Bering Strait. The land surrounding the strait was relatively warm 10 million years ago, and has been chilling steadily ever since. Dr. Pierce and her colleagues found that the first lineage of Polyommatus blues that made the journey could survive a temperature range that matched the Bering climate of 10 million years ago. The lineages that came later are more cold hardy, each with a temperature range matching the falling temperatures.

Nabokov’s taxonomic horseshoes turn out to belong in Nome after all.

“What a great paper,” said James Mallet, an expert on butterfly evolution at University College London. “It’s a fitting tribute to the great man to see that the most modern methods that technology can deliver now largely support his systematic arrangement.”

Dr. Pierce says she believes Nabokov would have been greatly pleased to be so vindicated, and points to one of his most famous poems, “On Discovering a Butterfly.” The 1943 poem begins:

I found it and I named it, being versed

in taxonomic Latin; thus became

godfather to an insect and its first

describer — and I want no other fame.

“He felt that his scientific work was standing for all time, and that he was just a player in a much bigger enterprise,” said Dr. Pierce. “He was not known as a scientist, but this certainly indicates to me that he knew what it’s all about.”

— 1 year ago
#Nabokov  #nytimes  #science  #biology  #insect  #history  #evolution  #polyommatus  #biogeography